Last updated: February 2021

We have tested a number of antibodies in human FFPE tissue specimens against different proteins for their compatibility with t-CyCIF. This list includes antibodies that are recommended for t-CyCIF; they demonstrate expected staining pattern in multiple tissue specimens.

Note: Performance does not infer validation.

You can browse, search, and sort (by clicking the table column heading) the following table.


Search Antibodies
Target Protein Fluorophore Performance (Human) Vendor Catalog Number Clone RRID Note
53BP1 * Cell Signaling Technology 4937 AB_10694558
ACTH Alexa Fluor 647 * Novus Biologicals NBP2-34529AF647 2F6 AB_2889346
AKT (pS473) Alexa Fluor 647 * Cell Signaling Technology 2337 193H12 AB_490782
Alpha-actin-2 Alexa Fluor 750 * R&D Systems IC1420S-025 1A4 AB_2868436
Annexin 5 Alexa Fluor 647 * BioLegend 640911
AREB6 Alexa Fluor 647 * Abcam ab216121 EPR17375 AB_2868420
AXL phycoerythrin * Cell Signaling Technology 78909 C89E7 AB_2799921
BANF1 Alexa Fluor 647 * Abcam ab208621 EPR7668 AB_2868493
BANF1 Alexa Fluor 568 * Abcam ab208534 EPR7668 AB_2868492
BCLXL Alexa Fluor 647 * Cell Signaling Technology 86387 54H6 AB_2800078
BIM phycoerythrin * Cell Signaling Technology 12186 C34C5 AB_2797842
BrdU Alexa Fluor 488 * BioLegend 364105 3D4 AB_2564499
BTK (pY551; pY511) eFluor 660 * Thermo Fisher Scientific 50-9015-80 M4G3LN AB_2574306 Discontinued
c-Jun Alexa Fluor 488 * Abcam ab193780 E254 AB_2728783 Discontinued
c-Myc * BioLegend 626801 9E10 AB_2235686
Calponin Alexa Fluor 555 * Abcam ab208051 EP798Y Discontinued
Catenin beta-1 Alexa Fluor 488 * BD Biosciences 562505 14 AB_11154224
CCNA phycoerythrin * Santa Cruz Biotechnology sc-271682 PE AB_10709300
CD10 FITC * Thermo Fisher Scientific MA5-16943 SN5c AB_2538419
CD10 Alexa Fluor 488 * Abcam ab225479 EPR5904-110 AB_2884941
CD10 * Abcam ab951 56C6 AB_2146533
CD103 Alexa Fluor 647 * BioLegend 350209 Ber-ACT8 AB_10640870
CD103 * Cell Marque (Millipore Sigma) 437R-15 EP206 AB_2884943
CD103 * Abcam ab129202 EPR4166(2) AB_11142856
CD115 * Abcam ab183316 SP211 AB_2885197
CD11a phycoerythrin * BioLegend 301207 HI111 AB_314145
CD11b Alexa Fluor 555 * Abcam ab206616 EPR1344 AB_2728809
CD11b Alexa Fluor 488 * BioLegend 101219 M1/70 AB_493545
CD11c * Thermo Fisher Scientific 14-9761-82 118/A5 AB_2572997
CD123 APC * Thermo Fisher Scientific (eBioscience) 17-1231-81 5B11 AB_891363 Discontinued
CD123 Alexa Fluor 488 * BioLegend 306035 6H6 AB_2629569
CD131 phycoerythrin * BD Biosciences 559920 JORO50 AB_397374
CD134 FITC * Thermo Fisher Scientific 11-1347-41 ACT-35 AB_10596491
CD14 phycoerythrin * Thermo Fisher Scientific 12-0149-41 61D3 AB_10597598
CD163 * Abcam ab87099 AB_11154711
CD166 Alexa Fluor 488 * Abcam ab197543 EPR2759(2) AB_2889210
CD1a phycoerythrin * BioLegend 300105 HI149 AB_314019
CD1c phycoerythrin * BioLegend 331505 L161 AB_1089000
CD2 * Abcam ab37212 AB_726228
CD20 phycoerythrin * BioLegend 302305 2H7 AB_314253
CD209 * Santa Cruz Biotechnology sc-65740 DC28 AB_1121347
CD23 phycoerythrin * Thermo Fisher Scientific 12-0232 B3B4 AB_465595
CD24 FITC * Abcam AB_726282 SN3 AB_726282
CD25 Alexa Fluor 647 * BioLegend 302617 BC96 AB_493046
CD25 * Abcam ab128955 EPR6452 AB_11141054
CD273 * Cell Signaling Technology 82723 D7U8C AB_2799999
CD278 * Cell Signaling Technology 89601 D1K2T AB_2800142
CD278 * Abcam ab105227 SP98 AB_10710236
CD303 * Millipore Sigma MABF94 10E6.1 AB_2889343
CD305 Alexa Fluor 647 * BioLegend 342802 NKTA255 AB_2133480
CD31 phycoerythrin * Thermo Fisher Scientific 12-0319-41 WM-59 AB_10670623
CD31 phycoerythrin * Abcam ab215660 JC/70A AB_2889211
CD31 FITC * Thermo Fisher Scientific (eBioscience) 11-0311-82 390 AB_465012
CD31 APC * Thermo Fisher Scientific 17-0319-41 WM-59 AB_10853188
CD34 phycoerythrin * Abcam ab30377 QBEND/10 AB_726407
CD39 * Abcam ab223842 EPR20627 AB_2889212
CD40 * Cell Signaling Technology 40868 D8W3N AB_2799188
CD45 * BioLegend 304047 HI30 AB_2563128
CD45RA Alexa Fluor 488 * BioLegend 304114 HI100 AB_528816
CD45RO APC * BioLegend 304210 UCHL1 AB_314426
CD49a * R&D Systems AF5676 AB_2129238
CD49b FITC * BioLegend 359305 P1E6-C5 AB_2562530
CD49b Alexa Fluor 647 * BioLegend 103511 HMa2 AB_528830
CD49b Alexa Fluor 647 * BioLegend 108912 DX5 AB_492880
CD56 * Abcam ab6123 ERIC-1 AB_2149537
CD68 APC * BioLegend 333809 Y1/82A AB_10567107
CD69 FITC * BioLegend 310904 FN50 AB_314839
CD71 phycoerythrin * Thermo Fisher Scientific 12-0711 R17217 AB_465739
CD71 FITC * BioLegend 334103 CY1G4 AB_1236432
CD73 * Abcam ab124725 EPR6115 AB_10976033 Discontinued
CD8 Alexa Fluor 647 * BioLegend 344725 SK1 AB_2563451
CD8 Alexa Fluor 647 * R&D Systems FAB1509R-025 37006 AB_2728841
CD80 FITC * R&D Systems FAB140F 37711 AB_357027
CD86 phycoerythrin * BioLegend 305405 IT2.2 AB_314525
CD8a Alexa Fluor 488 * Thermo Fisher Scientific (eBioscience) 53-0086-41 OKT8 AB_10547060
CD8a Alexa Fluor 488 * BioLegend 103511 53-6.7 AB_493423
CD8a * Thermo Fisher Scientific 14-0085 C8/144B AB_11151339
CDC2 FITC * Santa Cruz Biotechnology sc-54 FITC 17 AB_2074908
CDK1/2/3 (pT14) Alexa Fluor 488 * Abcam ab193829 E161
CDK4 phycoerythrin * Cell Signaling Technology 42749 D9G3E AB_2799229
CDK4 * Abcam ab108357 EPR4513-32-7 AB_10867218
CDX2 Alexa Fluor 647 * Abcam ab195008 EPR2764Y AB_2889213
Checkpoint kinase 1 (pS296) * MBL International D313-3 44-10-8 AB_11161214
Cleaved Caspase 3 (D175) Alexa Fluor 488 * Cell Signaling Technology 9669S Asp175 AB_10694067
Cleaved Caspase 3 (D175) Alexa Fluor 647 * Cell Signaling Technology 9602 D3E9 AB_2687881
Cleaved Caspase 3 (D214) Alexa Fluor 488 * Cell Signaling Technology 9603 D3E9 AB_11179205
Cleaved PARP (D214) Alexa Fluor 647 * Cell Signaling Technology 6987 D64E10 AB_10858215
COX IV-1 Alexa Fluor 488 * Cell Signaling Technology 4853 3E11 AB_2261052
CPS1 * Abcam ab129076 EPR7493-3 AB_11156290
CPT1A Alexa Fluor 488 * Abcam ab171449 8F6AE9 AB_2714024
Cyclin-E1 eFluor 660 * Thermo Fisher Scientific (eBioscience) 50-9714-80 HE12 AB_2574350
CytC Alexa Fluor 647 * Abcam ab192486 EPR1327 AB_2889214
Cytokeratin 14 Alexa Fluor 647 * Abcam ab206100 EPR17350 AB_2889215
Cytokeratin 19 eFluor 570 * Thermo Fisher Scientific 41-9898-80 BA17 AB_11218678
Cytokeratin 5 Alexa Fluor 488 * Abcam ab207351 EPR1600Y AB_2889216
Cytokeratin 8 Alexa Fluor 488 * Abcam ab192467 EP1628Y AB_2864346
E-cadherin Alexa Fluor 647 * Abcam ab194982 EP700Y AB_2889217
E2F-1 Alexa Fluor 555 * Abcam AB208078 EPR3818(3) Discontinued
E2F-1 * Thermo Fisher Scientific MS-879-P1 KH95 AB_143934 Discontinued
eEF2K * Santa Cruz Biotechnology sc-21642 K-19 AB_640043
Emil1 * Abcam ab18341 AB_444432
EpCAM FITC * Abcam ab8666 B29.1 (VU-1D9) AB_306701
ERK * Cell Signaling Technology 4696 L34F12 AB_390780
ERK (pT202; pY204) Alexa Fluor 647 * Cell Signaling Technology 4375 E10 AB_10706777
ERK-1 (pT202; pY204) * Cell Signaling Technology 4370 D13.14.4E AB_2297462
ET1 * Abcam ab2786 TR.ET.48.5 AB_303299
EZHZ2 Alexa Fluor 647 * Cell Signaling Technology 45638 D2C9 AB_2799287
FANCD2 Alexa Fluor 647 * Abcam ab200763 EPR2302 AB_2889218
FANCD2 * Bethyl Laboratories Inc. IHC-00624 AB_10752755
FLAG * Millipore Sigma F1804 M2 AB_262044
FN Alexa Fluor 488 * Abcam ab198933 F1 AB_2728807
FOXJ1 * Thermo Fisher Scientific PA5-36210 AB_2553418
FOXM1 * Cell Signaling Technology 5436S D12D5 AB_10692483
FOXM1 * Millipore Sigma HPA029974 AB_10670030
FOXO3 * Santa Cruz Biotechnology sc-9812 S-20 AB_640608
Gamma Tubulin Alexa Fluor 647 * Abcam ab191114 TU-30 AB_2889219
Gamma Tubulin Alexa Fluor 488 * Abcam ab205475 EPR16793 AB_2889220
GATA4 Alexa Fluor 647 * Abcam ab194072 EPR4768 Discontinued
GLUT1 Alexa Fluor 647 * Abcam ab195020 EPR3915 AB_2783877
Granzyme A APC * R&D Systems IC29051A 356412 AB_894691
Granzyme B * Abcam ab134933 EPR8260 AB_2889221
Granzyme B * Abcam ab4059 AB_304251
HER3 phycoerythrin * Cell Signaling Technology 77956 D22C5 AB_2799907
HGH Alexa Fluor 647 * Novus Biologicals NB500-364 AF647 GH-45 AB_10001069
Histone H2A.X (pS139) phycoerythrin * BioLegend 613412 2F3 AB_2616871
Histone H2A.X (pS139) Alexa Fluor 555 * Cell Signaling Technology 8228S 20E3 AB_10858874 Discontinued
Histone H2B * Santa Cruz Biotechnology sc-8650 AB_2118153 Discontinued
Histone H3.1 (K27me3) Alexa Fluor 647 * Cell Signaling Technology 12158 C36B11 AB_2797834
HMB45 * Abcam ab732 HMB45;DT101;BC199 AB_305844
HO1 Alexa Fluor 594 * Abcam ab215098 EPR1390Y AB_2889222
HO1 Alexa Fluor 488 * Abcam ab214643 EPR1390Y AB_2889223
HP1 alpha Alexa Fluor 647 * Abcam ab198391 EPR5777 AB_2728810
HSF1 * StressMarq Biosciences SMC-118 10H8 AB_2120255
Hsp90 beta (pS226) * Abcam ab63562 AB_1140737
Hsp90b * Santa Cruz Biotechnology sc-1057 D-19 AB_2121392 Discontinued
I-kappaB-Alpha * Cell Signaling Technology 4814 L35A5 AB_390781
IBA1 FITC * Bioss bs-1363R-FITC AB_11098006
IFNG Alexa Fluor 488 * BioLegend 502517 4S.B3 AB_493030
IL-1 beta FITC * BioLegend 511705 H1b-98 AB_1236434
IL-3 phycoerythrin * BD Biosciences 554383 Mp2-8F8 AB_395358
IL-6 FITC * BioLegend 501103 MQ2-13A5 AB_315151
IRF-1 Alexa Fluor 647 * Cell Signaling Technology 14105 D5E4 AB_2798393
IRF-3 * Cell Signaling Technology 10949 D9J5Q AB_2797733
IRF-4 * Abcam ab12501 MUM1p AB_2296152
IRF-5 Alexa Fluor 555 * Abcam ab210656 EPR17067 AB_2889224
IRF-7 phycoerythrin * Abcam ab210435 EPR4718 Discontinued
Lamin-A/C Alexa Fluor 488 * Abcam ab185014 EPR4100 AB_2889225
Lamin-B Alexa Fluor 647 * Abcam ab194108 EPR8985(B) AB_2889226
LAP Alexa Fluor 488 * BioLegend 349605 TW4-2F8 AB_10679043
LC3 Alexa Fluor 647 * Cell Signaling Technology 13394 D3U4C AB_2798205
LC3 * Abcam ab81785 AB_1640136
MAD2L2 Alexa Fluor 555 * Abcam ab210653 EPR13657 AB_2889227
MDM2 Alexa Fluor 647 * Abcam ab216076 SMP14 AB_2889228
MERTK * Abcam ab110108 AB_10858972
MGMT FITC * EpiGentek A52414-050 AB_2889338
MGMT Alexa Fluor 647 * Millipore Sigma MAB16200 AF647 MT3.1 AB_2281919
MGMT Alexa Fluor 647 * Novus Biologicals NB100-168 AF647 MT 23.2 AB_10002128
MGMT * Abcam ab39253 MT3.1 AB_776338
MGMT * Origene TA800856GM OTI4E6 AB_2625715
MITF * Abcam ab12039 C5 AB_298801
MITF * Abcam ab80651 AB_1603129
MRP1 Alexa Fluor 647 * BioLegend 370203 QCRL-2 AB_2566664
mTOR (pS2448) * Cell Signaling Technology 2971 AB_330970
mTOR (pS2448) eFluor 660 * Thermo Fisher Scientific (eBioscience) 50-9718-41 MRRBY AB_2574351
N-cadherin * Abcam ab18203 AB_444317
Nestin eFluor 570 * Thermo Fisher Scientific 41-9843-80 10C2 AB_2573652
Neurofibromin * Abcam ab178323 McNFn27b AB_2728814
NQO1 Alexa Fluor 647 * Abcam ab195874 A180 Discontinued
NRF2 Alexa Fluor 488 * Abcam ab194984 EP1808Y AB_2889229
NTRK1 * Abcam ab76291 EP1058Y AB_1524514
Nuclear factor NF-kappa-B p65 subunit Alexa Fluor 647 * Abcam ab190589 E379 AB_2728800
Olig2 Alexa Fluor 488 * Millipore Sigma AB9610-AF488 AB_570666
Olig2 Alexa Fluor 488 * Millipore Sigma MABN50A4 211F1.1 AB_11205039
Olig2 * Millipore Sigma AB9610-AF555 AB_570667
p-P44/42 MAPK (Erk1: pY204; Erk2: pY187) phycoerythrin * Cell Signaling Technology 75165S D1H6G AB_2728835
p53 Alexa Fluor 488 * Cell Signaling Technology 5429S 7F5 AB_10695458
PARP-1 (D214-cleaved) Alexa Fluor 555 * Cell Signaling Technology 6894S D64E10 AB_10830735
PCNA Alexa Fluor 647 * Abcam ab201674 PC10 AB_2857977
PD-1 Alexa Fluor 488 * Abcam ab195885 NAT105 Discontinued
PD-L1 phycoerythrin * BioLegend 329705 29E.2A3 AB_940366
PLK1 Alexa Fluor 647 * Bioss bs-3535R-A647 AB_2889334
PML Alexa Fluor 555 * Abcam ab217524 EPR16768 Discontinued
PMS2 Alexa Fluor 555 * Abcam ab203457 EPR3947 AB_2889230
POU5F1 Alexa Fluor 555 * Abcam ab210657 EPR17929 AB_2889231
PR eFluor 660 * Thermo Fisher Scientific 50-9764-80 KMC912 AB_2574363
PR Alexa Fluor 594 * Abcam ab207855 YR85
PTEN * Cell Signaling Technology 9559 138G6 AB_390810
Rac * BD Biosciences 610650 102/Rac1 AB_397977
RAD51 Alexa Fluor 488 * Abcam ab196449 EPR4030(3) AB_2889232
RB phycoerythrin * Cell Signaling Technology 14731 4H1 AB_2798590
RFP * Thermo Fisher Scientific R10367 AB_10563941
Runx eFluor 660 * Thermo Fisher Scientific (eBioscience) 50-9817-80 R3-5G4 AB_2574384
S100-A1 * Dako Z0311 AB_10013383
S100-A9 FITC * Abcam ab7429 MAC387 AB_305923
SDHB Alexa Fluor 647 * Abcam ab197722 21A11AE7 AB_2889233
SHMT2 * Abcam ab224427 AB_2889234
SirT3 * Cell Signaling Technology 2627 C73E3 AB_2188622
SMAD2 Alexa Fluor 647 * Abcam ab196538 EP567Y AB_2889235
Smooth Muscle Myosin Alexa Fluor 488 * Abcam ab197524 EPR5336(B) AB_2889236
Sox2 Alexa Fluor 647 * Abcam ab192075 AB_2728812
Stat1 phycoerythrin * Cell Signaling Technology 80916 D1K9Y AB_2799965
Stat1 Alexa Fluor 647 * Abcam ab200417 EPR4407 AB_2889237
Stat4 phycoerythrin * Abcam ab216702 EP1900Y AB_2889238
Stat5a Alexa Fluor 647 * Abcam ab194309 E289 AB_2889239
Stat6 Alexa Fluor 488 * Abcam ab196478 YE361 AB_2889240
Tbr2 * Millipore Sigma AB2283 AB_10806889
TCF1/TCF7 Alexa Fluor 488 * Cell Signaling Technology 6444 C63D9 AB_2797627
TDP43 Alexa Fluor 488 * Abcam ab193842 EPR5810 AB_2889241
TFEB * Abcam ab2636 AB_303224
TIA-1 * Santa Cruz Biotechnology sc-1751 C-20 AB_2201433 Discontinued
TIM3 Alexa Fluor 647 * Cell Signaling Technology 78226 D5D5R AB_2799911
TIM3 Alexa Fluor 488 * Cell Signaling Technology 54669 D5D5R AB_2799468
TLR3 phycoerythrin * Thermo Fisher Scientific MA5-16188 40C1285.6 AB_2537707
TLR3 * Santa Cruz Biotechnology sc-8691 AB_2240700 Discontinued
TLR3 * Santa Cruz Biotechnology sc-8692 C-20 AB_793169
TLR5 phycoerythrin * Thermo Fisher Scientific MA5-16241 19D759.2 AB_2537759
TNF-alpha Alexa Fluor 488 * BioLegend 502917 MAb11 AB_493122
TNF-alpha * Abcam ab11564 MP6-XT3 AB_298170
TNF-R1 * Abcam ab194814 H398 AB_2889242
TP53 Alexa Fluor 488 * Abcam ab156030 9D3DE3 AB_2889243
TSC2 (pS664) * Abcam ab133465 EPR8202 AB_11157389
TYRO3 * R&D Systems MAB859-SP 96201 AB_2210975
VDAC1 Alexa Fluor 647 * Abcam ab179840 20B12AF2
VDAC1 * Abcam ab15895 AB_2214787
XIAP * BD Biosciences 610762 48/ hILP1/ XIAP AB_398085
AKT (pS473) 0 Cell Signaling Technology 4051 587F11 AB_331158
AKT (pS473) 0 Cell Signaling Technology 9271 AB_329825
AKT (pS473) 0 Cell Signaling Technology 12694 D9W9U AB_2797994
AKT (pT308) phycoerythrin 0 Cell Signaling Technology 13842 D25E6 AB_2798327
AKT (pT308) 0 Cell Signaling Technology 2965 C31E5E AB_10233973
AKT (pT308) 0 Cell Signaling Technology 5106 L32A4 AB_836861
AKT (pT308) (pan) 0 Abcam ab8933 AB_306868
Akt-1 (pS473) 0 Cell Signaling Technology 4060 D9E AB_2315049
AKT1 (pS473) Alexa Fluor 647 0 Abcam ab194200 EP2109Y
AKT1 (pT308) 0 Abcam ab105731 18F3.H11 AB_10900490
ALDH1A1 phycoerythrin 0 Cell Signaling Technology 65583 D9Q8E AB_2799687
ALK 0 Santa Cruz Biotechnology sc-53157 ALK1 AB_628703
Amyloid Precursor Protein Alexa Fluor 647 0 Abcam ab199549 Y188 AB_2868404
Amyloid-beta precursor protein Alexa Fluor 488 0 BioLegend 803013 6E10 AB_2564765
Aquaporin 4 0 Abcam ab9512 4/18 AB_307299
AXL 0 Cell Signaling Technology 8661 C89E7 AB_11217435
BIM Alexa Fluor 488 0 Abcam ab200667 Y36 AB_2868516
BRD4 Alexa Fluor 488 0 Abcam ab197606 EPR5150(2) AB_2868517
c-Jun FITC 0 Santa Cruz Biotechnology sc-1694 FITC AB_631263 Discontinued
c-Jun (pS63) 0 Santa Cruz Biotechnology sc-822 KM-1 AB_627262
c-Myc 0 Santa Cruz Biotechnology sc-40 TRITC 9E10 AB_627268
CD103 APC 0 Thermo Fisher Scientific 17-1038-41 B-Ly7 AB_10669816
CD11a FITC 0 Thermo Fisher Scientific 11-0119-41 HI111 AB_10597888
CD11c phycoerythrin 0 BioLegend 337205 Bu15 AB_1236439
CD11c APC 0 BioLegend 337207 Bu15 AB_1279068
CD11c 0 BioLegend 117331 N418 AB_10900261
CD123 0 R&D Systems MAB301-100 32703 AB_2124263
CD13 0 BD Biosciences 561361 WM15 AB_10645787
CD133 phycoerythrin 0 Thermo Fisher Scientific 12-1338-41 TMP4 AB_1582258
CD137 0 Cell Signaling Technology 34594 D2Z4Y AB_2747410
CD141 Alexa Fluor 488 0 Abcam ab237063 EPR4051 AB_2889244
CD152 phycoerythrin 0 BioLegend 369603 BNI3 AB_2566796
CD163 phycoerythrin 0 Abcam ab95613 GHI/61 AB_10681084
CD163 Alexa Fluor 647 0 BioLegend 326507 RM3/1 AB_893268
CD163 Alexa Fluor 647 0 BioLegend 333619 GHI/61 AB_2563474
CD1b phycoerythrin 0 Abcam ab232916 SN13 AB_2889245
CD1d 0 Abcam ab11076 NOR3.2/13.17 AB_297728
CD2 FITC 0 BioLegend 300206 RPA-2.10 AB_314030
CD20 FITC 0 BioLegend 302303 2H7 AB_314251
CD20 Alexa Fluor 488 0 Thermo Fisher Scientific (eBioscience) 53-0202-80 L26 AB_10734357
CD206 Alexa Fluor 647 0 BioLegend 321116 15-2 AB_571881
CD26 Alexa Fluor 647 0 Santa Cruz Biotechnology sc-52642 AF647 5E8 AB_629016
CD28 Alexa Fluor 488 0 Santa Cruz Biotechnology sc-19655 AF488 CD28.2 AB_627002
CD28 0 Abcam ab113358 AB_10861658
CD31 ATTO 565 0 StressMarq Biosciences SPC-1283D-A565 AB_2712902
CD33 FITC 0 BD Biosciences 340533 P67.6 AB_400047
CD33 Alexa Fluor 647 0 Santa Cruz Biotechnology sc-53199 AF647 6C5/2 AB_782152
CD35 phycoerythrin 0 BioLegend 333405 E11 AB_2085021
CD35 phycoerythrin 0 Abcam ab82439 E11 AB_1658461
CD35 FITC 0 Abcam ab82441 E11 AB_2085008
CD365 phycoerythrin 0 BioLegend 353903 1D12 AB_11125165
CD3d FITC 0 Abcam ab34722 CD3-12 AB_2889246
CD3e eFluor 660 0 Thermo Fisher Scientific 50-0037-41 OKT3 AB_2574150
CD3e APC 0 Thermo Fisher Scientific 17-0038-41 UCHT1 AB_10804761
CD3e Alexa Fluor 647 0 BioLegend 300422 UCHT1 AB_493092
CD45R eFluor 660 0 Thermo Fisher Scientific (eBioscience) 50-0452-82 RA3-6B2 AB_11217671
CD45R eFluor 570 0 Thermo Fisher Scientific (eBioscience) 41-0452-80 RA3-6B2 AB_2573598
CD45R Alexa Fluor 647 0 BioLegend 103229 RA3-6B2 AB_492875
CD56 FITC 0 Thermo Fisher Scientific 11-0566-41 TULY56 AB_2572458
CD56 eFluor 660 0 Thermo Fisher Scientific 50-0565-80 5tukon56 AB_2574160
CD56 Alexa Fluor 647 0 BioLegend 362513 5.1H11 AB_2564086
CD56 Alexa Fluor 488 0 Abcam ab200333 EPR2566 AB_2728815
CD68 eFluor 570 0 Thermo Fisher Scientific 41-0687-80 815CU17 AB_2573600
CD68 ATTO 655 0 StressMarq Biosciences SMC-257 6F3 AB_2699772
CD68 Alexa Fluor 488 0 BioLegend 137011 FA-11 AB_2074847
CD69 0 Abcam ab202909 AB_2889247
CD83 0 BioLegend 305301 HB15e AB_314509
CD85j Alexa Fluor 647 0 BioLegend 333709 GHI/75 AB_2136384
CD8a Alexa Fluor 488 0 BioLegend 301024 RPA-T8 AB_2561282
CEP170 0 Abcam ab72505 AB_1268101
Cleaved PARP (D214) Alexa Fluor 647 0 BD Biosciences 558710 F21-852 AB_1645431
CtlP Alexa Fluor 647 0 Novus Biologicals NBP1-41205AF647 19E8 AB_2238010
CXCR5 FITC 0 BioLegend 356913 J252D4 AB_2561895
CXCR5 0 GeneTex GTX100351 AB_1240668
CXCR5 0 R&D Systems MAB190-SP 51505 AB_2292654
DNMT3A 0 Abcam ab13888 64B1146 AB_300714
E-cadherin FITC 0 BioLegend 324103 67A4 AB_756065
ERK Alexa Fluor 488 0 Cell Signaling Technology 4780 137F5 AB_1903964
ERK (pT202; pY204) Alexa Fluor 647 0 BioLegend 369503 6B8B69 AB_2571895
FGFR1 phycoerythrin 0 Cell Signaling Technology 12777 D8E4 AB_2798023
FOXO3 Alexa Fluor 647 0 Abcam ab196539 EP1949Y AB_2728818
FOXO3a 0 Cell Signaling Technology 2497S 75D8 AB_836876
FOXP3 Alexa Fluor 488 0 BioLegend 320011 150D AB_439747
GATA3 Alexa Fluor 594 0 BioLegend 653816 16E10A23 AB_2563353
GFAP 0 Millipore Sigma MAB3402C3 AB_11213580
Granzyme A eFluor 660 0 Thermo Fisher Scientific 50-9177-41 CB9 AB_2574330
Granzyme B FITC 0 Abcam ab17929 B18.1 AB_444109
Granzyme B Alexa Fluor 647 0 BioLegend 515405 GB11 AB_2294995
Granzyme B 0 Millipore Sigma HPA003418 AB_1079020
Granzyme B 0 Santa Cruz Biotechnology sc-73620 GRB7 AB_2114695
GRHL2 0 Abcam ab211360 AB_2889248
HIF1-alpha Alexa Fluor 647 0 BioLegend 359705 546-16 AB_2563331
Histone H2A.X (pS139) 0 Cell Signaling Technology 2577S Ser 139 AB_2118011
Homeo Box C10 0 Abcam ab153904 AB_2687827
HSF1 FITC 0 Abcam ab186360 4B4 Discontinued
HSF1 ATTO 655 0 StressMarq Biosciences SMC-477D A655 4B4 AB_2702303
HSF1 ATTO 565 0 StressMarq Biosciences SMC-476D-A565 10H4 AB_2702282
HSF1 ATTO 488 0 StressMarq Biosciences SMC-118D-A488 10H8 AB_2698025
IDO phycoerythrin 0 Cell Signaling Technology 10312 D5J4E AB_2797718
IDO eFluor 660 0 Thermo Fisher Scientific 50-9750-80 V1NC3IDO AB_2574357
IDO 0 Millipore Sigma MAB10009 1F8.2 AB_1977068
LAG-3 phycoerythrin 0 BD Biosciences 565617 T47-530 AB_2889327
LAG-3 phycoerythrin 0 R&D Systems FAB2319P AB_2133351
LAG-3 FITC 0 Thermo Fisher Scientific 11-2239-42 3DS223H AB_2572486
LAG-3 FITC 0 Adipogen AG-20B-0012F-C100 17B4 AB_2490196
LAG-3 0 Abcam ab40465 11E3 AB_776102
lkBa (pS32; pS36) Alexa Fluor 647 0 Thermo Fisher Scientific (eBioscience) 50-9035-41 RILYB3R AB_2574311
Ly6G 0 BioLegend 127629 1A8 AB_10899738
MCL1 Alexa Fluor 647 0 Abcam ab197035 Y37 AB_2800505
MCP1 FITC 0 LifeSpan BioSciences LS-C211505 AB_2889339
MCP1 Alexa Fluor 647 0 BD Biosciences 563496 5D3-F7 AB_2738242
MGMT 0 Cell Signaling Technology 2739 AB_2297658
MGMT 0 Origene TA800732EM OTI1B12 AB_2625647
MIP3 Alpha 0 Abcam ab122889 AB_10903028
MITF Alexa Fluor 488 0 Novus Biologicals NB100-56561AF488 21D1418 AB_838580
Mus81 Alexa Fluor 488 0 Novus Biologicals NB100-2064 AF488 MTA30 2G10/3 AB_1109412
NANOG Alexa Fluor 647 0 Abcam ab195018 EPR207(2) AB_2889249
NeuN Alexa Fluor 555 0 Abcam ab207281 EPR12763 AB_2889250
NeuN Alexa Fluor 488 0 Millipore Sigma MAB377X A60 AB_2149209
Neurofilament L Alexa Fluor 488 0 Cell Signaling Technology 8024 C28E10 AB_10860421
NGF receptor FITC 0 BioLegend 345103 ME20.4 AB_1937226
none (Nitrotyrosine) FITC 0 Abcam ab183390 39B6 AB_2889251
NOS2 Alexa Fluor 647 0 Cell Signaling Technology 48866 D6B6S AB_2799345
NOS2 Alexa Fluor 555 0 Abcam ab209594 EPR16635 AB_2889252
Notch1 0 Abcam ab8925 AB_306863
NRARP Alexa Fluor 555 0 Bioss bs-11914R-A555 AB_2889335
p44/42 (pT202; pY202; pY204) Alexa Fluor 488 0 Cell Signaling Technology 4374S E10 AB_10705598
p53 0 Santa Cruz Biotechnology sc-126 DO-1 AB_628082
p63 0 BioCare PM 366 AAK, HK 4A4 AB_2889329
PD-1 phycoerythrin 0 BioLegend 329905 EH12.2H7 AB_940481
PD-1 Alexa Fluor 488 0 BioLegend 329935 EH12.2H7 AB_2563593
PD-1 Alexa Fluor 488 0 BioLegend 367407 NAT105 AB_2566677
PD-1 0 Thermo Fisher Scientific 14-9985-81 J43 AB_468663
PD-1 0 Abcam ab63477 RMP1-14 AB_2159165
PD-1 0 R&D Systems AF1021 AB_354541
PD-L1 0 Dako M365329-1 22C3
PDGFR Alexa Fluor 555 0 Abcam ab206874 Y92 AB_2728816 Discontinued
PDGFR-alpha Alexa Fluor 555 0 Cell Signaling Technology 8893S D13C6 AB_2797679
POU5F1 Alexa Fluor 555 0 Cell Signaling Technology 4439 C30A3 AB_10922586
PrlR Alexa Fluor 488 0 Abcam ab201760 EPR7184(2) AB_2889253
RAD51 0 Thermo Fisher Scientific (Invitrogen) MA5-14419 51RAD01 (3C10) AB_10985045
Runx2 Alexa Fluor 647 0 Abcam ab215955 EPR14334 AB_2889254
S100-A4 FITC 0 BioLegend 370007 NJ-4F3-D1 AB_2572073
S100-A4 Alexa Fluor 488 0 BioLegend 370007 NJ-4F3-D1 AB_2572073
SATB1 Alexa Fluor 647 0 Abcam ab204469 EPR3895 AB_204469
SEC61A Alexa Fluor 647 0 Abcam ab205795 EPR14379 Discontinued
Sox2 Alexa Fluor 488 0 BioLegend 656109 14A6A34 AB_2563956
SPI1 Alexa Fluor 647 0 Cell Signaling Technology 2240 9G7 AB_2186911
SSTR2 0 Abcam ab216649 UMB1 AB_2889255
Stat6 Alexa Fluor 555 0 Abcam ab207014 YE361 AB_2889256
TP53 Alexa Fluor 488 0 Abcam ab204245 DO-1 Discontinued
TPCN2 0 Abcam ab119915 AB_10903692
YAP1 Alexa Fluor 647 0 Cell Signaling Technology 38707 D8H1X AB_2728837

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Funded by NIH grants P50-GM107618, U54-HL127365, U2C-CA233262, U2C-CA233280, U54-CA225088, the Ludwig Center at Harvard, and the Ludwig Cancer Research Foundation
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